Package Biskit :: Module Test :: Class Biskit

Class Biskit

Tests for modules in ~biskit/Biskit that don't call external applications.

Modules that are dependent of PVM have been excluded and can be found in Biskit_Pvm and modules that call external applications can be found in Biskit_Applications.

Nested Classes

[hide private]

Inherited from unittest.TestCase: failureException

Instance Methods

[hide private]

test_SettingsManager(self)
Testing Biskit.SettingsManager

test_FuzzyCluster(self)
Testing Biskit.FuzzyCluster

test_Ramachandran(self)
Testing Biskit.Ramachandran

test_ColorSpectrum(self)
Testing Biskit.ColorSpectrum

test_ChainCleaner(self)
Testing Biskit.ChainCleaner

test_ChainSeparator(self)
Testing Biskit.ChainSeparator

test_ChainWriter(self)
Testing Biskit.ChainWriter

test_Blast2Seq(self)
Testing Biskit.Blast2Seq

test_decorators(self)
Testing Biskit.decorators

test_ReduceCoordinates(self)
Testing Biskit.ReduceCoordinates

test_rmsFit(self)
Testing Biskit.rmsFit

test_SparseArray(self)
Testing Biskit.SparseArray

test_match2seq(self)
Testing Biskit.match2seq

test_Trajectory(self)
Testing Biskit.Trajectory

test_EnsembleTraj(self)
Testing Biskit.EnsembleTraj

test_ErrorHandler(self)
Testing Biskit.ErrorHandler No testing done.

test_MatrixPlot(self)
Testing Biskit.MatrixPlot No testing done, will just display a matrix plot

test_ModelList(self)
Testing Biskit.ModelList

test_molTools(self)
Testing Biskit.molTools

test_molUtils(self)
Testing Biskit.molUtils

test_PCRModel(self)
Testing Biskit.PCRModel

test_PDBCleaner(self)
Testing Biskit.PDBCleaner

test_PDBModel(self)
Testing Biskit.PDBModel

test_plotUtils(self)
Testing Biskit.plotUtils No testing done, will just display a mock plot

test_ProfileCollection(self)
Testing Biskit.ProfileCollection

test_gnuplot(self)
Testing Biskit.gnuplot No testing done, will just display a mock plot

test_tools(self)
Testing Biskit.tools No testing done.

test_surfaceRacerTools(self)
Testing Biskit.surfaceRacerTools No testing done.

test_TrajCluster(self)
Testing Biskit.TrajCluster No testing done.

test_XplorInput(self)
Testing Biskit.XplorInput No testing done.

test_DictList(self)
Testing Biskit.DictList No testing done.

test_LocalPath(self)
Testing Biskit.LocalPath No testing done.

test_LogFile(self)
Testing Biskit.LogFile No testing done.

test_ExeConfigCache(self)
Testing Biskit.ExeConfigCache No testing done.

test_ExeConfig(self)
Testing Biskit.ExeConfig No testing done.

test_hist(self)
Testing Biskit.hist

test_mathUtils(self)
Testing Biskit.mathUtils

test_Xplorer(self)
Testing Biskit.Xplorer No testing done.

Inherited from unittest.TestCase: __call__, __init__, __repr__, __str__, assertAlmostEqual, assertAlmostEquals, assertEqual, assertEquals, assertFalse, assertNotAlmostEqual, assertNotAlmostEquals, assertNotEqual, assertNotEquals, assertRaises, assertTrue, assert_, countTestCases, debug, defaultTestResult, fail, failIf, failIfAlmostEqual, failIfEqual, failUnless, failUnlessAlmostEqual, failUnlessEqual, failUnlessRaises, id, run, setUp, shortDescription, tearDown

Method Details