Package Biskit :: Module Test :: Class Biskit_Applications
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Class Biskit_Applications

source code


Tests for modules in ~biskit/Biskit that call external applications.

Modules that are dependent of PVM has been excluded and can be found in Biskit_Pvm.

Nested Classes [hide private]

Inherited from unittest.TestCase: failureException


Instance Methods [hide private]
  test_Dssp(self)
Testing Biskit.DSSP
  test_Prosa2003(self)
Testing Biskit.Prosa2003
  test_Hmmer(self)
Testing Biskit.Hmmer
  test_Fold_X(self)
Testing Biskit.Fold_X
  test_IcmCad(self)
Testing Biskit.IcmCad
  test_SurfaceRacer(self)
Testing Biskit.SurfaceRacer
  test_Pymoler(self)
Testing Biskit.Pymoler A PyMol wondow should be shown briefly ..
  test_msms(self)
Testing Biskit.msms
  test_PDBDope(self)
Testing Biskit.PDBDope No testing done.
  test_WhatIf(self)
Testing Biskit.WhatIf
  test_Executor(self)
Testing Biskit.Executor No testing done.

Inherited from unittest.TestCase: __call__, __init__, __repr__, __str__, assertAlmostEqual, assertAlmostEquals, assertEqual, assertEquals, assertFalse, assertNotAlmostEqual, assertNotAlmostEquals, assertNotEqual, assertNotEquals, assertRaises, assertTrue, assert_, countTestCases, debug, defaultTestResult, fail, failIf, failIfAlmostEqual, failIfEqual, failUnless, failUnlessAlmostEqual, failUnlessEqual, failUnlessRaises, id, run, setUp, shortDescription, tearDown


Method Details [hide private]

test_Dssp(self)

source code 

Testing Biskit.DSSP

test_Prosa2003(self)

source code 

Testing Biskit.Prosa2003

test_Hmmer(self)

source code 

Testing Biskit.Hmmer

test_Fold_X(self)

source code 

Testing Biskit.Fold_X

test_IcmCad(self)

source code 

Testing Biskit.IcmCad

test_SurfaceRacer(self)

source code 

Testing Biskit.SurfaceRacer

test_Pymoler(self)

source code 

Testing Biskit.Pymoler A PyMol wondow should be shown briefly .. not a real test.

test_msms(self)

source code 

Testing Biskit.msms

test_PDBDope(self)

source code 

Testing Biskit.PDBDope No testing done. Just let run trough.

test_WhatIf(self)

source code 

Testing Biskit.WhatIf

test_Executor(self)

source code 

Testing Biskit.Executor No testing done. Will open emacs breifly.