Package Biskit :: Module msms

Module msms

source code

Use MSMS to calculate surface info.

Note: This module is not any more the prefered module for surface area calculations. SurfaceRacer is the default module for this kind of calculations.

Classes

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pdb2xyzrnError

pdb2xyzrn
Run the awk script pdb_to_xyzrn to extract names and radii.

MSMS_Error

MSMS
Calculate SAS (Solvent Accessible surface) and SES (Solvent Excluded Surface) using the msms applicaton.

Test
Test class

Variables

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test = Test()

Variables Details

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test

Value:

Test()